Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETIIIALIAFIIGIIAIPIVLFAWIYIKDEKQQEHSILRNYPVIGRFRYILEKIGPELRQYLYSNDNEEQPFSRKEYEQTVISGKYKSRMMGFGSVRDFDKPGYYIRNAMFPKQREEMHVNQTPKIETQIYKMDADNLFKRKEHAEHIKADPYFLHPDDVQVIGEHTCEKPFYVKGLVGQSAMSYGS-LGERAVTALSKGLHLAGGTWMNTGEGGLSEYHLKGGAD-IICQIGP-GLFGVRKR---NGEFSWEEFKRKSRIDQIKAFELKLAQGAKTRGGHVDGAKVSEEVADIRNVEPGKSIDSPNRFYEFSNPPEMLDFIEKLRDVG--QKPVGIKLVAGHPEELHELFSHMQKSGKHPDFITIDGSEGGTGASFYE--LADTVGLPIMTALPIVDTLLKQYGLRSQLKIFASGKLLTPDKIAVALALGADFVNIARGMMFSVGCIRALVCHTNTCPAGVATTDPKLQKALSVEEKQHRVCNYVISLREGLFNLAAAAGINSPIHFSKEHVVYRKEDGSIINIDNLIHQFVS
1VCF Chain:A ((25-329))----------------------------------------------------------------------------------------------------------------------------------------TTGLEGFRLRYQALAGLALSEVDLTTPFLGK------TLKAPFLIGAMT---ENGERINLALAEAAEAL-GVGMMLGSGRILLERPEALRSFRVRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEA---------VQ------R----G-------------D-TDFRGLVERLAELLPLPFPVMVKEVGH-G-LSREAALALR--DLPLAAVDVAGAGGTSWARVEEWVELCEIGIPTARAILEVREVL------PHLPLVASGGVYTGTDGAKALALGADLLAVARPLLRPAL------------------------------EGAERVAAWIGDYLEELRTALFAIGARNPKEARGRV----------------------


General information:
TITO was launched using:
RESULT:

Template: 1VCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1696 -165777 -97.75 -583.72
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -97.75
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_1VCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VCF-query.scw
PDB file : Tito_Scwrl_1VCF.pdb: