Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLNMTPREIVAYLDEYIIEQKEAKKFIAIALRNRYRRLQ-LEKSLQEEITPKNILMIGSTGVGKTEIARRMAKIMKLPFVKV-EASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKERLKDKIEEAVVEKIAKKLLPPLPSGVSEEKKQEYANSLLKMQQRIAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENLIKVFHKEQDKVKKTLSVKEAKEALKAEISDTLLDGEAIKMEGLKRAESSGVIFIDEIDKIAVSSKEGSRQ-DPSKEGVQRDLLPIVEGSVVNTKYGSIKTE-HILFIAAGAFHLSKPSDLIP--ELQGRFPLRVELENLT-EEIMYMILTQTKTSIIKQYQALLKVEGVEIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIEKVLEDISFEAEDY-SGQSVTITKELVQSKLGDLVADENLVKYIL |
| 1G41 Chain:A ((2-444)) | ---SEMTPREIVSELDQHIIGQADAKRAVAIALR-NRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANA-PFIKVEATKFTV----GKEVDSIIRDLTDSAMKLVRQQEIAKNR-----------------------------------------------------------------------------------------------------LIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKG--EYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDH-ILFIASGAFQVARPSDLIPELQG--RLPIRVELTAL-SAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMN-GQTVNIDAAYVADALGEVVENEDLSRFIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169006 for 2563 contacts (-65.9/contact) +
2D Compatibility (PS) -35045 + (NN) -13831 + (LL) 9116
1D Compatibility (HY) -26400 + (ID) 8000
Total energy: -243166.0 ( -94.88 by residue)
QMean score : 0.581
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