Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKLV-HPKADVIASNGGVVAV-SGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIKSREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKL--SDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR--- |
| 1NF2 Chain:A ((1-267)) | -MYRVFVFDLDGTLLNDNLEISEKDRRNIEKL-SRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNV-------DYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERISTDCLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94753 for 2178 contacts (-43.5/contact) +
2D Compatibility (PS) -28766 + (NN) -16977 + (LL) 1120
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -158476.0 ( -72.76 by residue)
QMean score : 0.492
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