Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
4A2Y Chain:A ((1-133))
---------------------------RPPQFTRAQWFAIQHISLNPPRCTIAMRAINNYRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNISNCRYADRPGRRFYVVACDNRDP-RDSPRYPVVPVHLDTTI
General information:
TITO was launched using:
RESULT:
Template:
4A2Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56839 for 976 contacts (-58.2/contact) +
2D Compatibility (PS) -14201 + (NN) -11625 + (LL) 2848
1D Compatibility (HY) -13600 + (ID) 4400
Total energy: -97817.0 ( -100.22 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_4A2Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2Y-query.scw
PDB file :
Tito_Scwrl_4A2Y.pdb
: