Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDKG-AKKIAILDVDFHHGNGTQDIFYERGDVFFASLH-GDPAEAFPHFLGYAEETGKGAGAGTTANY--------PMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISF--FKLTSPDYITMGRTIAA-SGVPLLVVMEGGYGVPEIGLNVANVLKGVAG |
| 3C0Z Chain:A ((178-368)) | --------------------------------------------------------------------------------------------------------------------------------------------------KNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGS-GAVDEVGAGSGEGFNVNVAWAGGLDPPMG-DPEYLAAFRIVVMPIAR--EFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85350 for 1465 contacts (-58.3/contact) +
2D Compatibility (PS) -19183 + (NN) -6567 + (LL) 11080
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -113970.0 ( -77.80 by residue)
QMean score : 0.192
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