Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVIYLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGAGGSYRL-LRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPWAPRPGAAPPRVHYPALLAAAALLAQTALLLHCYL--GIVRRV--RVSVKRVSVLNFHLLHQLPGCAAAAAAFPGAQHAPGPGGAAHPAQAQPLPPALHPRRAQRRLSGLSVLLLCCVFLLATQPLVWVSLASGFSLPV--PWGVQAASWLLCCALSALNPLLYTWRNEEFRRSVRSVLPGVGDAAAAAVAATAVPAVSQAQLGTRAAGQHW |
| 3ZPR Chain:A ((14-299)) | ---------------------------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGT--------W--LWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAIT-SPFRYQSLMTRARAKVIICTVWAIS-ALVSFLPIMMHWWRDEDPQA------------------LKCYQDPGCCDFVTNRAYAIASSIISFY----IPLLIMIFVALRVYREAKEQ---------------MLMRE-HKALKTLGIIM--GVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIYC-RSPDFRKAFKRLL--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172309 for 1976 contacts (-87.2/contact) +
2D Compatibility (PS) -26965 + (NN) -10970 + (LL) 7348
1D Compatibility (HY) -25200 + (ID) 4150
Total energy: -232246.0 ( -117.53 by residue)
QMean score : 0.327
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