Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKL----ACSYEFINEIALAAFTTSAAF-ICLISIVLSYIRIF----STVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLP---------SDSSSTVDLVFSVFYTV--IPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL |
| 2YCW Chain:A ((3-299)) | ---------AELLSQQWEAGMSLLMALVVL----LIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPI----MMHWWRDEDPQALKCYQDPGCC-DFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVM-LMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231436 for 1989 contacts (-116.4/contact) +
2D Compatibility (PS) -28512 + (NN) -8498 + (LL) 3008
1D Compatibility (HY) -25200 + (ID) 3550
Total energy: -294188.0 ( -147.91 by residue)
QMean score : 0.297
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