Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELWNFTLGSGFILVGILNDSGSPELLCATITILYLLALISNGLLLLAITMEARLHMPMYLLLGQLSLMDLLFTSVVTPKALADFLRRENTISFGGCALQMFLALTMGGAEDLL-LAFMAYDRYVAICHPLTYMTLMSSRACWLMVATSWILASLSALIYTVYTMHYPFCRAQEIRHLLCEIPHLLKVACA--------DTSRYELMVYVMGVTFLIPSLAAILASYTQILLTVLHMPSNEGRKKALVTCSSHLTVVGMFYGAATFMYVLPSS----FHSTRQDN-------IISVFYTIVTPALNPLIYSLRNKEVMRALRRVLGKYMLPAHSTL |
| 2I35 Chain:A ((39-312)) | -------------------------MLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFA-TLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAI-MGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIP-LIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDDE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200934 for 1994 contacts (-100.8/contact) +
2D Compatibility (PS) -25925 + (NN) -6091 + (LL) 3160
1D Compatibility (HY) -24800 + (ID) 3350
Total energy: -257940.0 ( -129.36 by residue)
QMean score : 0.210
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