Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGMEGLLQNSTNFVLTGLITHPAFPGLLFAVVFSIFVVAITANLVMILLIHMDSRLHTPMYFLLSQLSIMDTIYICITVPKMLQDLLSKDKTISFLGCAVQIFYLTLIGGEFFLLGL--MAYDRYVAVCNPLRYPLLMNRRVCLFMVVGSWVGGSLDGFMLTPVTMSFPFCRSREINHFFCEIPAVLKLSCT-------DTSLYETLMYACCVLMLLIPLSVISVSYTHILLTVHRMNSAEGRRKAFATCSSH------IMVVSV------FYGAAFYTNVLPHSYHTPEKDKVVSAFYTILTPMLNPLIYSLRNKDVAAALRKVLGRCGSSQSIRVATVIRKG |
4PXF Chain:A ((39-312)) | --------------------------MLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATL-GGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWV-------------MALA-CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP-IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215441 for 1856 contacts (-116.1/contact) +
2D Compatibility (PS) -25813 + (NN) -8409 + (LL) 3096
1D Compatibility (HY) -25200 + (ID) 3250
Total energy: -275017.0 ( -148.18 by residue)
QMean score : 0.177
|
|
|