Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENNQSSTLEFILLGVTGQQEQEDFFYILFLFIYPITLIGNLLIVLAICSDVRLHNPMYFLLANLSLVDIFFSSVTIPKMLANHLLGSKSISFGGCLTQMYFMIALGNTDSYI--LAAMAYDRAVAISRPLHYTTIMSPRSCIWLIAGSWVI-GNANALPHTLLTASLSFCGNQEVANFYCDITPLLKLSCSDIHFHVKMMYL---GVGIFSVPLLCIIVSYIRVFSTVFQVPSTKGVLKAFSTCGSHLTVVSLYYGTVMGTY---FRPL----------TNYSLKDAVITVMYTA-VTPMLNPFIYSLRNRDMKAALRKLFNKRISS |
| 4LDE Chain:A ((199-463)) | ----------------------------------------GNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVP-FGAAHIL-TKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP---IQMHWYRATHQEAINCYAEET------CCD--FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQ---EAKRQLQ---KFA-LKEHKALKTL--GIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172988 for 1658 contacts (-104.3/contact) +
2D Compatibility (PS) -24728 + (NN) -1814 + (LL) 6000
1D Compatibility (HY) -22000 + (ID) 3400
Total energy: -218930.0 ( -132.04 by residue)
QMean score : 0.199
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