Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGKNQTNISEFLLLGFSSWQQQQVLLFALFLCLYLTGLFGNLLILLAIGSDHCLHTPMYFFLANLSLVDLCLPSATVPKMLLNIQTQTQTISYPGCLAQMYFCMMFANMDNFLLT-------VMAYDRYVAICHPLHYSTIMALRLCASLVAAPWVIAILNPLLHTLMMAHLHFCSDNVIHHFFCDINSLLPLSCSDTSLNQLSVLATVGLIFVVPSVCI----LVSYILIVSAVMKVPSAQGKLKAFSTCGSHLALVILFYGAITGVYMSPLSNHSTEKDSAASVIFMVVAPVLNPFIYSLRNNELKGTLKKTLSRPGAVAHACNPSTLGGRGGWIMRSGDRDHPG
2YCZ Chain:A ((9-239))------------------QWEAGMSLLMALVVLLIVAG---NVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM----HWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRA-SKRKRVMLMREHKALKTL--GIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF------------------


General information:
TITO was launched using:
RESULT:

Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152243 for 1401 contacts (-108.7/contact) +
2D Compatibility (PS) -22851 + (NN) -12367 + (LL) 4292
1D Compatibility (HY) -18800 + (ID) 3150
Total energy: -205119.0 ( -146.41 by residue)
QMean score : 0.074

(partial model without unconserved sides chains):
PDB file : Tito_2YCZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCZ-query.scw
PDB file : Tito_Scwrl_2YCZ.pdb: