Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDNITSITEFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFS--TFAVTECL-LLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKLACADTHINENMVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQRKAFCTCFSH--LCVIGLFYGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL |
| 4LDO Chain:A ((190-402)) | ------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--TKTWTF-GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSF----LPIQMHWYRATHQEAINC----YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVY----SRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178733 for 1350 contacts (-132.4/contact) +
2D Compatibility (PS) -20717 + (NN) -5819 + (LL) 4324
1D Compatibility (HY) -16400 + (ID) 2650
Total energy: -219995.0 ( -162.96 by residue)
QMean score : 0.239
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