Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNDDGKVNASSEGYFILVGFSNWPHLEVVIFVVVLIFYLMTLIG---NLFIIILSYLDSHLHTPMYFFLSNLSFLDLCYTTSSIPQLLVN------LWGPEKTISYAGCMIQLYFVLALGTTECVLLVVMSYDRYAAVCRPLHYTVLMHPRFCH---LLAVA-SWVSGFTNSALHSSFTFWVPLCGHRQVDHFFCEVPALLRLSC-VDTHV------NELTLMITSSIFVLIPLILILTSYGAIV----RAVLRMQSTTGLQKVFGTCGAHLMAVSLFFIPAMCIYLQPPSG--------NSQDQGKF---IALFYTVVTPSLNPLIYTLRNKVVRGAVKRLMGWE 1F88 Chain:A ((45-314)) -------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHAIMGVAFTWVMALACAA--------PPLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA----SATTQKA----EKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG

General information: TITO was launched using: RESULT: Template: 1F88.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -180014 for 1752 contacts (-102.7/contact) + 2D Compatibility (PS) -23169 + (NN) 1840 + (LL) 5500 1D Compatibility (HY) -26400 + (ID) 3400 Total energy: -225643.0 ( -128.79 by residue) QMean score : 0.283

(partial model without unconserved sides chains): PDB file : Tito_1F88.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1F88-query.scw PDB file : Tito_Scwrl_1F88.pdb: