Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSLTDLCFSPIQVAEIKSLPKSMNETNHSRVTEFVLLGLSSSRELQPFLF-LTFSLLYLAILLG---NFLIILTVTSDSRLHTPMYFLLANLSFID--VCVASFATP--KMIADFLVERKTISFDACLAQIFFVHLFTGSEMVL--LVSMAYDRYVAICKPLHYMTVMSRRVCVVLVLISWFVGFIHTTSQL-AFTVNLPF-----CGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGFLSLSSFLLLVVSYTVILVTVRNRSSASMAKARSTLTAHITVVTLFF--------GPCIFIYVWPFSSYS-VDKVLAVFYTIFTLILNPVIYTLRNKEVKAAMSKLKSRYLKPSQVSVVIRNVLFLETK |
| 2X72 Chain:A ((36-318)) | -----------------------------------------------EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT----GCNLQGFFATL--GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHA-IMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCG---IDYYTPHEETNNESFVIYMFVVHFIIP-----LIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233039 for 1801 contacts (-129.4/contact) +
2D Compatibility (PS) -26084 + (NN) -9131 + (LL) 5132
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -266772.0 ( -148.12 by residue)
QMean score : 0.175
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