Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKEQDSNVTEFVLLGLSSSWELQLFLFLLFLFFYIAIVLGNLLIVVTVQAHAHLLQSPMYYFLGHLSFIDLCLSCVTVPKMLGDFLQQGKSISFSGCLAQIYFLHFLGASEMFLLTVMAYDRYVAICNPLRYLTVMNPQLCLWLVLACWCGGFIHSIMQVILVIQLPF-CGPNELDNFYCDVPQVIKLACMDTYVVEVLVIANSGLLS-------LVCFLVLLFSYAIILITLRTHFCQGQNKVFSTCAS-HLTVVSLIFVPCVFIYLRPFCSFS----------VDKIF---SLFYTVITPMLNPLIYTLRNTDMKTAMKKLRIKPCGIPLPC |
| 4BEZ Chain:A ((34-318)) | ----------------LAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKK--LRTPLNYILLNLAVADLFMVFGDFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF----------------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293901 for 2029 contacts (-144.9/contact) +
2D Compatibility (PS) -26084 + (NN) -3565 + (LL) 3560
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -324890.0 ( -160.12 by residue)
QMean score : 0.151
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