Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFN--SRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAF-RKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 4MUO Chain:A ((1-320)) | MDYRKIIKEIGR---------------------GKNHARDL-------DRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQ-------------NHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKL------------------GFPVVVHGV------------SEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNSAHTLAKLAT---PFAEGEALRLSSVSH-------------------PEYIGRVAKFFSDIGGRALLMH--------GTEGEVYANPQRCPQINLIDREGMRVLY-------------EKQ-----AKDPETTAQWIERCLA----------------GSEPIPESLKIQMACCLVATGEAA---TISDGLARVNQAF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -337610 for 2622 contacts (-128.8/contact) +
2D Compatibility (PS) -31162 + (NN) 1602 + (LL) 14784
1D Compatibility (HY) -7200 + (ID) 3150
Total energy: -362736.0 ( -138.34 by residue)
QMean score : 0.225
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