Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHFTKNSQVLDVAGGTGDIAIRIVRREPSVQVTVCDINQNMLSRGRNKAINSNQLNFNWVCANAESLPFEDSEFDCCTIAFGIRNVSDRKKALSEIHRVLKPNGQFICLEFAPMHYKNEIFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK |
| 3L8D Chain:A ((50-151)) | -----------------------------------------YVKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPD-LSF--IKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDG-YACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKRGVNEKMLGQLSTDLQQSLTFLWVFMLKRHK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71015 for 801 contacts (-88.7/contact) +
2D Compatibility (PS) -11147 + (NN) -5289 + (LL) 3784
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -91167.0 ( -113.82 by residue)
QMean score : 0.499
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