Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQKQYN-----LGKSL-----KCKKKSLLTKVK---------NLLRFQEEKKSVDEKSRDIAKPREIKSEKSIDNKKNELVIAKIY
2KON Chain:A ((1-82))
MNVAHYRGYEIEPGHQYRDDIRKYVPYALIRKVGVPDRTPIPTTYPEFYDLEADAERVSIACAKIIIDSHLDRHDQGLADLG-----
General information:
TITO was launched using:
RESULT:
Template:
2KON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 43456 for 365 contacts (119.1/contact) +
2D Compatibility (PS) -6228 + (NN) 5847 + (LL) 708
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 41133.0 ( 112.69 by residue)
QMean score : 0.101
(partial model without unconserved sides chains):
PDB file :
Tito_2KON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KON-query.scw
PDB file :
Tito_Scwrl_2KON.pdb
: