Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVPKKSKYRKVFKGRIKGNTKGGSTLSFGDYGLKTIEAGRVQSKHIETVRRVISRTLKRSGKIWIRIFPDTPISKKPTDVRMGKGKGSVEFWVFKAKPGRVLFEISSDVPMHLAKLALEKAMAKLPVKCKFISNYS
3DLL Chain:J ((6-133))
----KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAG-VTEEQAKEAFRLAGHKLPIQTKMVKREV
General information:
TITO was launched using:
RESULT:
Template:
3DLL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36190 for 864 contacts (-41.9/contact) +
2D Compatibility (PS) -13512 + (NN) -6378 + (LL) 316
1D Compatibility (HY) -10800 + (ID) 3300
Total energy: -69864.0 ( -80.86 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_3DLL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DLL-query.scw
PDB file :
Tito_Scwrl_3DLL.pdb
: