Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKS-KQKG-SNIKAVALGHHEGNVIMGQK--GMH-LNEFNNGDDYHFGIPHRY------STH-------------------YLLLEELRKQLKIKPGHFSYHEMSPA--------------------------EMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHFKQSRDVLTQSAAW-T--SYG--DLTIKPSGYQEITTLVKQHHLF-NPPAYDDFVEPSLYKEASRS |
| 2DE3 Chain:A ((20-362)) | ------------------------------------DTLTYSNSPVPNALLTASE--SGFLDAAGIELDVLSGQQGTVHFTYDQPAYTRFGGEIPPLLSEGLRAPGRTRLLGITPL-LGRQGFFVRDDSPITAAADL---AGRRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGELGVDDVELVPISSPGVDVPAEQLEESATVKGADLFPDVARGQAAVLASGDVDALYSWLPWAGELQATG-ARPVVDLGLDERNAYASVWTVSSGLVRQRPGLVQRLVDAAVDAGLWARDHSDAVTSLHAANLGVSTGAVGQGFGADFQQRLVPRLDHDALALLERTQQFLLTNNLLQEPVALDQWAAPEFLNNSLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64156 for 2273 contacts (-28.2/contact) +
2D Compatibility (PS) -29658 + (NN) -13031 + (LL) 3060
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -110435.0 ( -48.59 by residue)
QMean score : 0.389
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