Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNQIQKLL-DSDLSSLHISKQTGVPQSTIHRMRKKERSLDNMSLKNAELLYKFANSIFSNEN
2KPJ Chain:A ((12-64))
--ENLNSYIAKSEKTQLEIAKSIGVSPQTFNTWCKGIA---IPRMGKVQALADYFNIN-----
General information:
TITO was launched using:
RESULT:
Template:
2KPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12136 for 301 contacts (-40.3/contact) +
2D Compatibility (PS) -5718 + (NN) -2965 + (LL) 428
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -23291.0 ( -77.38 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2KPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KPJ-query.scw
PDB file :
Tito_Scwrl_2KPJ.pdb
: