Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKNATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDD-KGPRGTRIFGPVARELREGNFMKIVSLAPEVL
3IZZ Chain:G ((2-122))
-IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV-
General information:
TITO was launched using:
RESULT:
Template:
3IZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62333 for 907 contacts (-68.7/contact) +
2D Compatibility (PS) -13197 + (NN) -5060 + (LL) 384
1D Compatibility (HY) -14000 + (ID) 4000
Total energy: -98206.0 ( -108.28 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3IZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IZZ-query.scw
PDB file :
Tito_Scwrl_3IZZ.pdb
: