Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKNFKLRISTLLLIVILVVFAVLLIVNETKLFKNDVNYSFDEAVSMQQGKGIVQTKEEDGKFVEANNNEIAKAMTISHKDNDMKYMDITEKVPMSESEVNQLLKGKGILENRGKVFLEAQEKYEVNVIYLVSHALVETGNGKSELAKGIKDGKKRYYNFFGI-GAFDSSAVRSGKSYAEKEQWTSPDKAIIGGAKFIRNEYFENNQLNLYQMRWNPENPAQHQYASDIRWADKIAKLMDKSYKQFGIKKDDIRQTYYK |
3FI7 Chain:A ((42-90)) | ---------------------------------------------------------------------------------------------------------------------MDLCKKYNLYPSVMIAQAALESNWGRSEL------GKAPNYNLFGIKGSYNGKSV--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FI7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4641 for 235 contacts (-19.7/contact) +
2D Compatibility (PS) -5223 + (NN) -1997 + (LL) 15052
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -1659.0 ( -7.06 by residue)
QMean score : 0.058
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