Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MIQTVVAAAVLYIATAVDLLVILLIFFARAKTRKEY------RDIYVGQYLGSI------------ILILVSLFLAFVLNYVPEKWILGL-----LGLIPIYLGIKV--------------AIYDDCEGEKRAKKELNEKGLSKLVGTVAIVTI----ASCGADNIGLFVPYFVTLSVTNLLLTLFVFLILIF---FLVFTAQKLANIPG----IGEIVEKFSRWIMA----IIYIALGLFIIIE---NDTIQTILGFIF-- |
| 4LL1 Chain:A ((5-296)) | IKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGSVDYWVKAFLDRPSQPTQETKKNFEVVPDLMAPVSAKKEKKVSSMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTSSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKINILRVEYSLLIYVSVPGSKKVILDLPLVIGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LL1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226711 for 1390 contacts (-163.1/contact) +
2D Compatibility (PS) -22093 + (NN) 10345 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -243109.0 ( -174.90 by residue)
QMean score : 0.089
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