Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVFLLLFMLGGLEAHSDYCSDHCEGTPDSRIPPMGFHFSFVHSVKYYLQDPQKR--DHKLEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQAQKETP
1I17 Chain:A ((17-70))
------------------------------------LDIDFGA-EGNRYYAANYWQFPDGIYYEGCSEA-------NVTKEMLVTSCVNATQAANQAEFSRE
General information:
TITO was launched using:
RESULT:
Template:
1I17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4415 for 219 contacts (-20.2/contact) +
2D Compatibility (PS) -5329 + (NN) -1395 + (LL) 2528
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -10811.0 ( -49.37 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1I17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I17-query.scw
PDB file :
Tito_Scwrl_1I17.pdb
: