Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLKLHVKAFRFETNKDYNPAYESYFLEY-QEDQYLLDLLKQLK----GVSYNE----NIALKIN----QIAVFE-DAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKEVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERNRLLEMISKPESGVMNFLSVAHYLYKNDDNIDHEIYELQEMLTNSKIKPWKDFSKNLLSLFQYNSNPPKTPNPPKTCALFNAYAKHLNAQALLKSAKLYLERMGQKVIDLPFCYDGGYYGKIISTHDFLTACAYNLALAKANGVSLIFCEEDSYLNILHAKEVLDNNPEIIDSVNEKLKKYQLVYEKGVEVVYLNEWVNEFLAWELKSPFDAFLGAEFSRIKPSDHFFNKIHLKAPHFLESFQNYAPLLEVNEVSGLLQCAHLRYLGIDLGADFLIVHSLGLFHAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGEKNKQTLGLDAHYHKVTFI |
2W3S Chain:A ((11-84)) | ------------------------TRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAGSRAVNACLMMLPQIAG--KALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAHDRDRKDYDDLLAGNLCRCTGYAPILRAAEAAAGEPPADWLQADAAFTLPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAEGPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPGLRCYKLSKRFDQDISAVCGCLNLTLKGSKIETARIAFGGMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGEAVAVLEVMP------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20537 for 326 contacts (-63.0/contact) +
2D Compatibility (PS) -6440 + (NN) -156 + (LL) 5964
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -23619.0 ( -72.45 by residue)
QMean score : 0.299
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