Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVAD--TYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYK--GDKISKLSEPILVKT---SFINPVESVFASLEYPKSVKVFWSPHPNP--SV--SKYIIQRQN-KDG--KFLN-VGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTK-DLP-KEIANVRVSQNLTRQIELSWDKSPE--EDVIAYRIYASNNRNDK-----YKF-IAQTTNTSYVDKIEKDNLTRYYKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQDSSALIQWENNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 2V5Y Chain:A ((275-568)) | ----------------------------------------------------------ATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPV---DSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGR-KE-SQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGF-GPPAT-NQFTTKISAPSM---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11793 for 1775 contacts (-6.6/contact) +
2D Compatibility (PS) -27554 + (NN) 1803 + (LL) 9764
1D Compatibility (HY) 800 + (ID) 1450
Total energy: -28430.0 ( -16.02 by residue)
QMean score : 0.315
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