Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPL-DLRRLEKLH--FDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNIVGSNESPENVYGFSKLCMDEFVLSHSSD---NVVGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSGVYNVGYSQARSYNEIVSILKEHLGDF-KVSYIKNPYTFFQ----KHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
| 3RUH Chain:A ((26-343)) | ----------KTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNF------STGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHI-----KYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFLK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142588 for 2594 contacts (-55.0/contact) +
2D Compatibility (PS) -31358 + (NN) -12514 + (LL) 1264
1D Compatibility (HY) -19200 + (ID) 4350
Total energy: -208746.0 ( -80.47 by residue)
QMean score : 0.462
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