Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSL-EWGLLIFL-------ILVFLVGIGYYVFMVFSSKD
1LMM Chain:A ((1-40))EDCIPKWKGCVNRHGDCCEGLECWKRRRSFEVCVPKTPKT


General information:
TITO was launched using:
RESULT:

Template: 1LMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28727 for 135 contacts (-212.8/contact) +
2D Compatibility (PS) -3632 + (NN) -1500 + (LL) 0
1D Compatibility (HY) 0 + (ID) 200
Total energy: -34059.0 ( -252.29 by residue)
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_1LMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LMM-query.scw
PDB file : Tito_Scwrl_1LMM.pdb: