Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEYKDTLNLNETTFSMKGNLSVNEPKTYAKWQEQQAFKRMQNRKDNHGDFTLHDGPPYANGHLHLGHALNKILKDIVIKREYFKGKKIYYTPGWDCHGLPIEQQILEQLEKE--KTSLENPTLFR---------EKCRDHAKKFLEIQKNEFLQLGVLGDFEDPYKTMDF--KFEASIYRALVGVAKKGLLKERHKPIYWSYACESALAEAEVEYKMKKSP---SIFVAFDLKKEGLEKLKVKKASLVIWTTTPWTLYANVAIALKKDAVYALT-------QKGYLVAKALHEKLAALGVVDNAITHEFNSNDLEYLVATNPLNQRDSLVVLGDHVSLEDGTGAVHTAPGHGEEDYYL--GLKYHLEVLMSVDEKGCYDEGIIH-------NQLLDKS--------------YLGEH---IFKA---QKRIIEQLGDSL---LLEREI-EHSYPHCWRT------HKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIEKVEFVPSSGKNRLKTMIENRPDWCLSRQRKWGVPLAF----FIDKRTNKPCFES--EVLEHVANLFEEKGCDVWWEYNIKDLLPPSYQDNAKHYEKVMHILDVWFDSGSTFKAVLEDYHGEKGQSPSDVVLEGSDQHRGWFQ-----------SSLLIGCVLNNQAPF------KKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWV---AFNDYQNDLRVSQTFFI--QTEQHYKKFRNTLKFLLANFSDMDLK-NLERPHDFSPLDHFILEALETISAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAVASQLCYFLAPILTHTIEEVLEHSQVLRAFLQAKDVFDLKGISVLEKLHLKEFKKPENFEAVLALRSAFNEELDRLKKEGVVKNSLECAIEVKEKALCENLVEELLMVSFVGVAKEKLSETPAFTLFKAPFYKCPRCWRFKSELENTPCKRCEEVLKER |
| 1WKB Chain:A ((5-807)) | -------------------NFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPI-VGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDL-MEGEDVPILDYIIIKFELRENG-EVIYLPAATL-----RPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLS-FQDREIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIV-----FPAVEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQEVKEAIAKEMLEKGIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFI---------DYGNPEWKEKARKALERMKILPETRRAQFEAIIDWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQEGKLD-------PEKLTPEFFD---------------YIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLE-GQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYE--------LISQFAEYEVKGNVE----LKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDL----------RWYLRRTEGRDDEAKRYVLRTLADVWVRLMAPFTPHICEELWEKLG-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207373 for 5531 contacts (-37.5/contact) +
2D Compatibility (PS) -73727 + (NN) -19248 + (LL) 18412
1D Compatibility (HY) -40400 + (ID) 8750
Total energy: -331086.0 ( -59.86 by residue)
QMean score : 0.343
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