Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTG---REKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
2BV6 Chain:A ((22-136))
----------------------NRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSETIRPELSNASDKVASAS--SLSQDEVKELNRLLGKV--
General information:
TITO was launched using:
RESULT:
Template:
2BV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17282 for 727 contacts (-23.8/contact) +
2D Compatibility (PS) -12179 + (NN) -6581 + (LL) 2208
1D Compatibility (HY) -8400 + (ID) 1500
Total energy: -43734.0 ( -60.16 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2BV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BV6-query.scw
PDB file :
Tito_Scwrl_2BV6.pdb
: