Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLTRKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFV--V------GTTIGIQGVIMPLVVFTAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGLIGATAMAGLVGA--GGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLKKD
2ONK Chain:C ((67-275))
--------DPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKS-------FPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERY-LSEGLSAAMPVAAILILLSLAVFVALRIIVG-----
General information:
TITO was launched using:
RESULT:
Template:
2ONK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -220537 for 1512 contacts (-145.9/contact) +
2D Compatibility (PS) -20069 + (NN) 3879 + (LL) 1280
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -246947.0 ( -163.32 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_2ONK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ONK-query.scw
PDB file :
Tito_Scwrl_2ONK.pdb
: