Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERL-KADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAIT-L-KDNNKQIYSV---LQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEA------GQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSAT-DALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKH----SGETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
2O3O Chain:A ((8-252)) | ---------------------------------KEYEVIKNDVEHDMKADHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMPSDDHKVTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIFFQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKESL--ITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKEKKTVQEYFTVNALESTILDT-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48301 for 1533 contacts (-31.5/contact) +
2D Compatibility (PS) -23620 + (NN) -3315 + (LL) 4844
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -87242.0 ( -56.91 by residue)
QMean score : 0.470
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