Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLE--TAEHAIALAKNHPDLFIGQHTNFLLGKPCANPAEIPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSI-GDETVDQAFFDIAREFGIHTTLKYSGDKKWSDQEGYLPITKLLESGALPYTNGGVSVENFLNDDFGLLKLAPNEIAEMHFDVGFLDQFVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR |
| 2NLY Chain:A ((4-137)) | -KRAAIIIDDFGGDV----KGVDDFLTGEI-PVTVAVMPFLEHSTKQAEIAQA-AGLEVIVHMPLEPK----------------------PS--GITS-NLSVGEVKSRVRKAFDDIPYAVGLNN-HM-GSKIVENEKIMRAILEVVKEKNAFIIDSGTS-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44739 for 932 contacts (-48.0/contact) +
2D Compatibility (PS) -13555 + (NN) -3963 + (LL) 8172
1D Compatibility (HY) 400 + (ID) 850
Total energy: -54535.0 ( -58.51 by residue)
QMean score : 0.411
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