Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFDKLMGKAAIVTESSYGIERFLDEDEQIIQIFKFIRDEVIITSKGIFNIDAQGIT----GKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTSFSAPISLKVHKNDT-EMGFALYKMIKGML |
4Q8K Chain:A ((175-248)) | -------------------------------------------------LEAQHITPNGNGWRHEYKV--KESLRVAMTQTYEVFEATVKVEMSDGGKTIISQHHASDTGTISKVYVSDTDESGF---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 11065 for 289 contacts (38.3/contact) +
2D Compatibility (PS) -6890 + (NN) 611 + (LL) 5520
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: 6856.0 ( 23.72 by residue)
QMean score : 0.173
|
|
|