Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKKLTVGGKFDWYIDTLEKSGMFILELSNEEIETFIFEDFIVGVTSFFSKNNLSELKANEIIDEDMEKNAYLLREKVLKIDNTDLWNINSVRQSSEWLDIFRRSDELKRQLKERWSDEEIEYLKTL |
2RMJ Chain:A ((872-907)) | ----------DWGIHVKYKT----FEIPVIKIESFVVEDIATGVQTLYSK---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1630 for 145 contacts (11.2/contact) +
2D Compatibility (PS) -3799 + (NN) 364 + (LL) 7048
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 1343.0 ( 9.26 by residue)
QMean score : -0.199
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