Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDP--DPHSNQKLRFVIERAKTYN------VPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVE--GKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFERLIDALEDLEDVQKVYHNVELED |
| 2YP8 Chain:A ((72-199)) | ------------------------------------GDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACKRKSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIWGVHHPGTDNDQIF------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17050 for 517 contacts (33.0/contact) +
2D Compatibility (PS) -12351 + (NN) -7251 + (LL) 10364
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: 2362.0 ( 4.57 by residue)
QMean score : 0.087
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