Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLVCNAGMSTSFLVEKMKAAGTEQGVEANIWAVSDAELHENWEKADVILLGPQVGYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG
1E2B Chain:A ((3-100))
KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLP-NKPVEVIDSLLYGKVDGLGVLKAAVAAI-
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75938 for 815 contacts (-93.2/contact) +
2D Compatibility (PS) -10484 + (NN) -2697 + (LL) -344
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -100713.0 ( -123.57 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: