Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRIFC-------GIMSIQAGFIGALA-------EILSPDSKKNNLFM---IPEDLAASSGYLMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER
1U6T Chain:A ((1-121))
VIRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNES-----QYRGDYDAFFEARE--NNAVYAFLGLTAPPGS-------KEAEVQAKQQALEHHHHHH-----
General information:
TITO was launched using:
RESULT:
Template:
1U6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111103 for 629 contacts (-176.6/contact) +
2D Compatibility (PS) -10953 + (NN) -3655 + (LL) 2000
1D Compatibility (HY) 1600 + (ID) 900
Total energy: -123011.0 ( -195.57 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1U6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U6T-query.scw
PDB file :
Tito_Scwrl_1U6T.pdb
: