Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTA-NFVMNTLEEQVVQESTDG-TTKYLFKLSDGNLIETVMMK-QEYGLSVCVTTQVGCNIGCTFCASGLLKKS------RDLTAGEIVEQIMNVQHY-LDGRN---------LEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAP-RIID-FANE-DFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEH---IDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE |
| 2YX0 Chain:A ((11-304)) | ---------------------------------------KITVQANPNMPKEVAELFRKQHYEIVGRH--SGVK-LCHWLKKSLTE--GRFCYKQKFYGIHSHRCLQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKPKVDKKKFEEAWNPTHAAISLSGEPMLY-PYMGDLVEEF-HKRGF-----TTFIVTNGTIPERLEEMIKEDKL-PTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLELMRD-LPTRTVVRLTLVKG--ENMHSPEKYAKLILKAR-PMFVEAKAYM-----NRLTINNMPSHQDIREFAEALVK--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YX0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121207 for 2107 contacts (-57.5/contact) +
2D Compatibility (PS) -28078 + (NN) -9614 + (LL) 8020
1D Compatibility (HY) -3200 + (ID) 2450
Total energy: -156529.0 ( -74.29 by residue)
QMean score : 0.404
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