Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVS----PEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK |
| 1VCF Chain:A ((23-270)) | --------------------------KTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMT---ENGERINLALAEAAEALGVGMMLGSGRILLERPEALRSFR-VRKVAPKALLIANLGLAQLRRYGRDDLLRLVEMLEADALAFHVNPLQEAV-QRGDTDFRGLVERLAELLPL-PFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGTSWARVEEWV-------ELCEIGIPTARAILEVR-EVLPHLPLVASGGVYTGTD------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102074 for 1802 contacts (-56.6/contact) +
2D Compatibility (PS) -25453 + (NN) -8368 + (LL) 9876
1D Compatibility (HY) -23600 + (ID) 4150
Total energy: -153769.0 ( -85.33 by residue)
QMean score : 0.426
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