Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYEMISDYKDNKMYRDSFNRLAESTFDINFEEWYRDG--FWNDKYICYSYIDDNKVIANVSINKMNLIYQGEDYRALQIGTVMTHPDYRGQGLAKKLLEHVIAKYEDQYDFL-YLFANDTVL--DFYPKFGFERVEESSFTVDACSLKRESSNLKKLNPGNKTDFQLISRIVSEKTPLSNILDVRESEDLLMFYVLIALKNELYYIEELDVIVLMEQEDADLYVLDILSTKKLDVVEVLRYLPIKKIETIHLLFTPEKSKYIDAAHIIETEDMLFVRPNILTNENYFLFPATSHA |
| 4MY0 Chain:A ((28-194)) | -----------------SFGLLAAGAR----EDWVRDAVEFVHDGRFL-GVVSGDEVVAAARIWDFQQWWGGRRVPMAGIAGVVVAPEYRGRGVGSLLMRGVLERSRDKGMPISALYPATTVIYRHLGYEFGGHRYRFSFQAADLRSLGGREVAVRRAGAKDAARFLELVGTAHEASRASGLLVWPESK----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41470 for 916 contacts (-45.3/contact) +
2D Compatibility (PS) -17369 + (NN) -7358 + (LL) 11816
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -65181.0 ( -71.16 by residue)
QMean score : 0.375
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