Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LMKHLTLWHTNDVHSHLEHWP-----------------RIFNFLKEKRTAADKENQSALFFDIGDFLDRVHPLTEGTNGLANTDLLNQLPYDVVTFGNNEGTTLAHEDLDKLYEHAVFPVVCCNFYTNKECTEQPDWVKSIVYK--EIEQVKIAIIGATAPFRDYYEEMGWGI--EEPISSIKKQVAGLDE-DTDVVILLSHLGLPSDERIALEIPEVDVILGGHTHHLLETGKIEGNALLAAA---------GR---------WGEYIGKVDIELDENNQILTKTAMTFKTE-DLPAAPNEANEIQGFF----DKGRAELSEKVVAIPGKLAHNWFDDSEIAHILNEAVCE----------WTGAETFVMNAGIFMTDFEAGIVTDFDIHQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMERAGFDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKWKLKKMYGQEEDK |
| 4H2B Chain:A ((27-390)) | ----LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA----EPNVLLLDAGDQYQGTIWFTV-YKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIEPLLKEAKFPILSANISASGPLASQISGLY-LPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLDSSIPEDPSIKADINKWRIKLDDYSTQELGKTIVYLDGSSQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGG------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128478 for 2401 contacts (-53.5/contact) +
2D Compatibility (PS) -33157 + (NN) -9027 + (LL) 11592
1D Compatibility (HY) -20800 + (ID) 4150
Total energy: -184020.0 ( -76.64 by residue)
QMean score : 0.356
|
|
|