Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPEQFQMALAEKGIELSDD---QMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPIE |
3G8A Chain:F ((14-248)) | ---ERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEA----------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33470 for 1861 contacts (18.0/contact) +
2D Compatibility (PS) -23327 + (NN) -7493 + (LL) 692
1D Compatibility (HY) 9200 + (ID) 1050
Total energy: 11492.0 ( 6.18 by residue)
QMean score : 0.083
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