Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLRQVTLKNTHQTSGIDKWISWLKKDISVRNRHKSKKLSLKKQRKVVQLFNNLFASGFSLTDMVTFLKRSKLLSDYYTDRMNKALLEGKDLSKMLGELGFSDTVIT----QVALAD-LHGN-ISRSLL-KIESYLANLLLVRKKVIEVAT-YPLILLTFL-----------------VLIMIGLRHYLMPQLGENNFATSLITNVPNIFLLLLAVVLIFSLIFYIVQKRLSRI---KVACFLTTIPLVGSYVKLYLTAYYAREWGNLLSQGVELDQIVK-VMQNQKSKLFREIGYDMEEGFLSGKAFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDIYADEKWEDFFTKLARATQLIQPVIFIFVALIIVMIYAAMLLPMYQNMEILS |
| 4UY5 Chain:A ((2-327)) | ----TLSLANYLAA---DSAAEALRRDVRAGLTAAPKSLP-------PKWFYD--AVGSDLFDQIT------RLPEYYPTRTEAQILRTRS-AEIIAAAG-ADTLVELGSGTSEKTRMLLDAMRDAELLRRFIPFDVDAGVLRSAGAAIGAEYPGIEIDAVCGDFEEHLGKIPHVGRRLVVFLGSTIGNLTPAPRAEFLSTLADTLQPGDSLLLGTDLVKD------TGRLVRAYDDAAGVTAAFNRNVLAVVNRELSADFDLDAFEHVAKWNSDEERIEMWLRARTAQHVRVAALDLEVDFAAGEEM----------LTEVSCKFRPENVVAELAE-AGLRQTHWWTD-------------PAGDFGLSLAVRLEHHHH------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204521 for 2235 contacts (-91.5/contact) +
2D Compatibility (PS) -30774 + (NN) 2678 + (LL) 7116
1D Compatibility (HY) -4400 + (ID) 2900
Total energy: -232801.0 ( -104.16 by residue)
QMean score : 0.108
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