Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MVIIVRKKIRAYILLESLVGLAI-----------LVTITSLVISEINRQQSHIARRQHEQEVLIL--------ARMAVQTDQKILEANGVNIRIEESKNKIVLFEG-------NKEILHVSKVKG |
| 4YMR Chain:A ((11-144)) | VLPELRRAQSLTCTGLYREALALWANAWQLQTQLGTPSGPDRPLLTLAGLAVCHQELEDPGEARACSEKALQLLGDKRPHPFLAPFLEAHVRLSWRLGLDKRQSEAQLQALQEAGLTSTPPPSLKELLIKEVLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YMR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1039 for 556 contacts (1.9/contact) +
2D Compatibility (PS) -10955 + (NN) -7637 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -19553.0 ( -35.17 by residue)
QMean score : 0.245
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