Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKVIIFDMDGVIVDS-EYTFLDNKTEMLREEGID-TDVSYQYQYMGTTFEFMWQAMKEEFGLPKTVKEYIAEMNRRRQAIVAR--DGVRPIK---GAQRLIHWLHQHGYRLAVASSS---PMVDIKRNLKELGVTECFEYMVTGEDVSSSKPAPDVFLRAAELLDVDPKVCIVIEDTRNGSLAAKAAGMYCFGFANPDYPPQDLSMADKVISDYQDIYIYLPE
2WF6 Chain:A ((1-192))
MFKAVLFDLDGVITDTAEYHFRAWKA-LAEEIGINGVDRQFNEQLKGVSREDSLQKILD-LADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFL-----LERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL
General information:
TITO was launched using:
RESULT:
Template:
2WF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108393 for 1414 contacts (-76.7/contact) +
2D Compatibility (PS) -20684 + (NN) -16715 + (LL) 420
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -156322.0 ( -110.55 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2WF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WF6-query.scw
PDB file :
Tito_Scwrl_2WF6.pdb
: