Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHSILLVDGYNMIAFWKDTRQLFKSNRLEEAREVLLRKLNHYAHFEHIDIICVFDAQYVPGVRQRYDQYKISVIFTEEDETADSYIERAAAELNQSVLNLVSVATSDLNEQWTIFSQGTLRVSARELEQRVATVKSDLDKMSSQIDLSTPKLRPWNDEQLGKLKDFLDGM
4EZ5 Chain:A ((56-113))
-----------------------------LSTIREVAV--LRHLETFEHPNVVRLFDVC-----------TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAVTLWYRAPEVLLQSSYATPVDLWSVG
General information:
TITO was launched using:
RESULT:
Template:
4EZ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15293 for 202 contacts (-75.7/contact) +
2D Compatibility (PS) -5609 + (NN) -4432 + (LL) 3116
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -27768.0 ( -137.47 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_4EZ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EZ5-query.scw
PDB file :
Tito_Scwrl_4EZ5.pdb
: