Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIHKYPSKKAKNGYLYLVKVYMTRDGQRADHIKRGFRTRKEAKDYEARLIYLKASGKLEEFIKPTHKTYNEIFEKWYQAY-QDTVEPTTASRTLDMFRLHILPVMGDLPISKISPLDCQNFIIEKAKV--FKNIKQIKSYTGKVFDFAIKMKLLKHNPMTEIIMPKRKKTRIENYWTVQELQEFLAIVLQEEPYKHYALFRLLAYSGLRKGELYALKWADIDFQSETLSVNKSLGRLDGQAIEKGTKNDFSVRRIK-------LDSETISILQEWKANCQKEKAQLAVAPLSIEQDFIFTYCTRSGSIEPLHADYINNVLSRIIRKHGLR----KISPHGFRHTHATLMIEIGVDPVNTAKRLGHASSQMTLDTYSHSTTNGEDKSIKQFADYLKAK |
| 1Z1B Chain:A ((71-348)) | ----------------------------------------------------------------DNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIK-AIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNHVAATRAAKS--KVRRSRLTADEYLKIYQAAESSP-CWLRLAMELAVVTGQRVGDLCEMKWSDIV--DGYLYVEQSKTG--------------VKIAIPTALHIDALGISMKETLDKCKEIL--------------GGETIIA--STRR--EPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSAR-LYEKQISDKFAQHLLGHKSDTMA-SQYRDDRGREWDKIEIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120990 for 1952 contacts (-62.0/contact) +
2D Compatibility (PS) -27617 + (NN) -5448 + (LL) 8184
1D Compatibility (HY) -6000 + (ID) 2450
Total energy: -154321.0 ( -79.06 by residue)
QMean score : 0.471
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