Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METRNEKFRRLSEARMTKVFSILNILRNQSD--------KSKYTFSKSDIEELFGALEQK---GEEIKEFFTSPITIKTVNLKNSFHYSVVDTSNDKEVSFKKLSTARVEKIFSLMNLIANLSNKSNYNYSDWEVEELFSAYDEEVKKCKVFFEEKRTVFKYS |
1VPQ Chain:A ((199-255)) | -------------------YAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDVVELSRRVKETYVFFNNCYKGQAAINALQFKKMLEE----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188 for 228 contacts (-0.8/contact) +
2D Compatibility (PS) -5146 + (NN) -3126 + (LL) 6916
1D Compatibility (HY) -4400 + (ID) 350
Total energy: -6294.0 ( -27.61 by residue)
QMean score : 0.372
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